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中华实验和临床感染病杂志(电子版) ›› 2019, Vol. 13 ›› Issue (05) : 382 -388. doi: 10.3877/cma.j.issn.1674-1358.2019.05.007

所属专题: 文献

论著

多通道分子信标聚合酶链反应在新生儿侵袭性念珠菌感染快速诊断中的应用
张雨1, 曾慧慧1,(), 温春玲1, 蔡晓沂2, 赵娜2, 李兴旺3   
  1. 1. 100026 北京,首都医科大学附属北京妇产医院新生儿科
    2. 100076 北京,泰普舜康医学检验实验室有限公司
    3. 100015 北京,首都医科大学附属北京地坛医院感染性疾病医疗质量控制中心
  • 收稿日期:2018-06-10 出版日期:2019-10-15
  • 通信作者: 曾慧慧
  • 基金资助:
    首都医科大学附属北京妇产医院中青年学科骨干培养专项(No. FCYY201722); 北京市医院管理局儿科学科协同发展中心儿科专项(No. TYB201815)

Application of multi-channel molecular beacon polymerase chain reaction in rapid diagnosis of neonatal invasive Candida infection

Yu Zhang1, Huihui Zeng1,(), Chunling Wen1, Xiaoyi Cai2, Na Zhao2, Xingwang Li3   

  1. 1. Neonatal Department, Beijing Obstetrics and Gynecology Hospital, Capital Medical University, Beijing 100026, China
    2. Beijing Taipu-Shunkang Institute for Laboratory Medicine, Beijing 100076, China
    3. The National Clinical Key Department of Infectious Diseases, Beijing Ditan Hospital, Capital Medical University, Beijing 100015, China
  • Received:2018-06-10 Published:2019-10-15
  • Corresponding author: Huihui Zeng
  • About author:
    Corresponding author: Zeng Huihui, Email:
引用本文:

张雨, 曾慧慧, 温春玲, 蔡晓沂, 赵娜, 李兴旺. 多通道分子信标聚合酶链反应在新生儿侵袭性念珠菌感染快速诊断中的应用[J]. 中华实验和临床感染病杂志(电子版), 2019, 13(05): 382-388.

Yu Zhang, Huihui Zeng, Chunling Wen, Xiaoyi Cai, Na Zhao, Xingwang Li. Application of multi-channel molecular beacon polymerase chain reaction in rapid diagnosis of neonatal invasive Candida infection[J]. Chinese Journal of Experimental and Clinical Infectious Diseases(Electronic Edition), 2019, 13(05): 382-388.

目的

初步建立新生儿侵袭性真菌感染(IFI)常见念珠菌的多通道分子信标荧光聚合酶链反应(MQ-PCR)检测体系,实现新生儿IFI病原体的早期检出,并探讨患儿不同部位念珠菌检出率的差异。

方法

收集2018年1月至2019年4月首都医科大学附属北京妇产医院收治的34例临床诊断为脓毒败血症并疑似IFI新生儿的血液、深部痰液和咽拭子标本;常规行血培养及微生物鉴定,并应用MQ-PCR体系对3类标本进行念珠菌检测,比较两种方法念珠菌阳性检出率和检测时长。

结果

本研究MQ-PCR体系检测白色念珠菌、近平滑念珠菌、光滑念珠菌和热带念珠菌的检出下限均为50 FU/ml,线性检测范围为5 × 101~1 × 105 CFU/ml,且MQ-PCR体系所检出细菌与其他14种常见致病性细菌或DNA序列同源性较高的真菌无交叉反应。9例(9/34、26.5%)患儿经血培养念珠菌阳性确定为IFI;此9例IFI患儿同一血液样本、自身不同部位(深部痰液、咽拭子)样本行MQ-PCR均检出念珠菌阳性,且检出菌种与血培养完全一致。比较血标本两种方法念珠菌阳性检出率:血培养法为26.5%(9/34),MQ-PCR为32.4%(11/34),差异无统计学意义(χ2 = 0.5、P = 0.5)。血培养法念珠菌阳性检出率(26.5%)和相应的自身不同部位标本MQ-PCR法念珠菌阳性检出率差异均无统计学意义(P均> 0.05),其中咽拭子、深部痰液和血标本中念珠菌阳性检出率分别为41.2%(14/34)、32.4%(11/34)和32.4%(11/34)。MQ-PCR检测血液、深部痰液和咽拭子标本时长分别为3.5(3.2,3.9)h、3.1(2.9,3.2)h和2.7(2.5,2.9)h,较血培养时长[94.0(78,105.8)h]显著缩短,差异均有统计学意义(Z =-2.7、P = 0.008,Z =-2.5、P = 0.013,Z =-2.7、P = 0.008)。

结论

对IFI新生儿多部位标本应用MQ-PCR检测念珠菌,较血培养具备高符合率及快速检出的优点,利于新生儿念珠菌定植及血流感染的早期诊断及动态监测。

Objective

To preliminarily establish a multi-channel molecular beacon polymerase chain reaction (MQ-PCR) method for early detection of common Candida pathogens associated with invasive fungal infections (IFI) in newborns, and to explore the differences of Candidas detection in different parts of neonates with IFI.

Methods

Throat swabs, deep sputum and blood samples from 34 neonates suspected of invasive fungal infection in Neonatal Intensive Care Unit (NICU), Beijing Obstetrics and Gynecology Hospital, Capital Medical University, from January 2018 to April 2019 were collected. Blood culture and strain identification were performed routinely, and Candidas were also detected by MQ-PCR system in three types of samples. The positive detection rate and detection period of the two methods were compared, respectively.

Results

The lower detection limits of the MQ-PCR system for Candida albicans, Candida parapsilosis, Candida glabrata and Candida tropicalis were all 50 CFU/ml, and the linear detection ranges were all 5 × 101-1 × 105 CFU/ml. Bacteria detected by MQ-PCR system did not cross-react with 14 other common pathogenic bacteria or fungi with high homology DNA sequence. IFI was identified in 9 cases (26.47%) among the 34 infants by positive Candidas in blood culture. Meanwhile, the same blood sample and the patient’s own (deep sputum and pharyngeal swab) samples from different parts of the above 9 children with IFI were also positive for Candidas by MQ-PCR, and the detected strains were identical with blood culture. The positive detection rate of Candida in blood samples by the two methods was basically the same (χ2 = 0.5, P = 0.5), which were 26.5% (9/34) by the culture method and 32.4% (11/34) by MQ-PCR. Compared with the positive detection rate of Candida in blood samples by blood culture (26.5%), there was no significant difference in different parts of the samples by MQ-PCR (all P > 0.05), which were 41.2% (14/34) in pharyngeal swabs, 32.4% (11/34) in deep sputum, and 32.4% (11/34) in blood. Candida detection period of MQ-PCR in blood [3.5 (3.2, 3.9); Z =-2.7, P = 0.008], deep sputum [3.1 (2.9, 3.2); Z =-2.5, P = 0.013], swabs [2.7 (2.5, 2.9); Z =-2.7, P = 0.008] were significantly shorter than that of Candida blood culture [94.0 (78, 105.8)].

Conclusions

Compared with blood culture, MQ-PCR had the advantages of high coincidence rate and early detection when used to detect common Candidas pathogens in multi-types of specimens from neonatal IFI patients. MQ-PCR was helpful for early diagnosis of bloodstream infection and dynamic monitoring of Candida colonization in neonates.

表1 念珠菌上、下游引物及探针序列
图1 4种念珠菌标准菌株于不同梯度稀释浓度时的扩增曲线
表2 34例临床疑似IFI患儿的基本信息、念珠菌MQ-PCR和血培养法检测
患儿编号 胎龄(周) 感染发生日龄 咽拭子PCR 深部痰液PCR 血液PCR 血培养
1 27 23 白色念珠菌 白色念珠菌 白色念珠菌 白色念珠菌
2 29 35 白色念珠菌 白色念珠菌 白色念珠菌 白色念珠菌
3 26 17 近平滑念珠菌 近平滑念珠菌 近平滑念珠菌 近平滑念珠菌
4 30 19 近平滑念珠菌 近平滑念珠菌 近平滑念珠菌 近平滑念珠菌
5 31 27 近平滑念珠菌 近平滑念珠菌 近平滑念珠菌 近平滑念珠菌
6 26 9 近平滑念珠菌 近平滑念珠菌 近平滑念珠菌 近平滑念珠菌
7 27 29 近平滑念珠菌 近平滑念珠菌 近平滑念珠菌 近平滑念珠菌
8 33 17 近平滑念珠菌 近平滑念珠菌 近平滑念珠菌 近平滑念珠菌
9 29 13 近平滑念珠菌 近平滑念珠菌 近平滑念珠菌 近平滑念珠菌
10 28 31 近平滑念珠菌 近平滑念珠菌 近平滑念珠菌
11 27 11 近平滑念珠菌 近平滑念珠菌 近平滑念珠菌 屎肠球菌
12 36 15 白色念珠菌 草绿链球菌
13 40 10 白色念珠菌
14 39 8 白色念珠菌
15 31 20 屎肠球菌
16 29 35 表皮葡萄球菌
17 27 33 绿脓杆菌
18 28 38 鲍曼不动杆菌
19 27 47 屎肠球菌
20 35 12 大肠埃希菌
21 27 33 肺炎克雷伯菌
22 31 51 鲍曼不动杆菌
23 29 23 屎肠球菌
24 40 17 表皮葡萄球菌
25 31 20 屎肠球菌
26 30 30 金黄色葡萄球菌
27 28 26 肺炎克雷伯菌
28 30 21 表皮葡萄球菌
29 33 18 表皮葡萄球菌
30 38 13 草绿链球菌
31 36 9 屎肠球菌
32 31 23
33 34 14
34 29 7
表3 自身不同部位同一时间样本MQ-PCR法与血培养法念珠菌阳性检出率[例(%)]
表4 血培养和MQ-PCR体系不同部位样本念珠菌的检测时间
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